runtime exception opening czi in Multiview Registration

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runtime exception opening czi in Multiview Registration

Mario Emmenlauer-3

Dear All,

I'm not sure who to address this to: I'm using Multiview Registration,
trying to fuse a large czi series. It opens the file with Bio-Formats,
which at first works fine, and the XML gets created. But when I start
interest point detection, I get (attached) error about a RuntimeException
in spim.fiji.spimdata.imgloaders.LightSheetZ1ImgLoader.getFloatImage().

Can you please advise what to do? I have all newest updates from
today, as far as the Fiji updater found them. And I'm using the
BigDataViewer additional repository, Sun Java 1.7.71, nothing special
otherwise...

All the best,

    Mario



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Mario Emmenlauer BioDataAnalysis             Mobil: +49-(0)151-68108489
Balanstrasse 43                    mailto: mario.emmenlauer * unibas.ch
D-81669 München                          http://www.biodataanalysis.de/

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Re: runtime exception opening czi in Multiview Registration

Stephan Preibisch
Hi Mario,

can you please file this as an issue on github?

https://github.com/bigdataviewer/SPIM_Registration/issues <https://github.com/bigdataviewer/SPIM_Registration/issues>

Thanks so much,
Stephan
---

Dr. Stephan Preibisch
HFSP Fellow
Robert H. Singer / Eugene Myers lab

Albert Einstein College of Medicine / HHMI Janelia Farm / MPI-CBG

email: [hidden email] <mailto:[hidden email]> / [hidden email] <mailto:[hidden email]> / [hidden email] <mailto:[hidden email]>
web: http://www.preibisch.net/ <http://fly.mpi-cbg.de/preibisch>

> On May 5, 2015, at 14:45 , Mario Emmenlauer <[hidden email]> wrote:
>
>
> Dear All,
>
> I'm not sure who to address this to: I'm using Multiview Registration,
> trying to fuse a large czi series. It opens the file with Bio-Formats,
> which at first works fine, and the XML gets created. But when I start
> interest point detection, I get (attached) error about a RuntimeException
> in spim.fiji.spimdata.imgloaders.LightSheetZ1ImgLoader.getFloatImage().
>
> Can you please advise what to do? I have all newest updates from
> today, as far as the Fiji updater found them. And I'm using the
> BigDataViewer additional repository, Sun Java 1.7.71, nothing special
> otherwise...
>
> All the best,
>
>    Mario
>
>
>
> --
> Mario Emmenlauer BioDataAnalysis             Mobil: +49-(0)151-68108489
> Balanstrasse 43                    mailto: mario.emmenlauer * unibas.ch
> D-81669 München                          http://www.biodataanalysis.de/
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> <RuntimeException.txt>


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