RGB profiler

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RGB profiler

Cole, Richard W (HEALTH)
Dear all,

It seems that the plug-in RGB profiler is through the following error:  Is this know or is there a workaround?

RGB_Profiler not up-to-date because 1 source files are not up-to-date (C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\src\main\java\RGB_Profiler.java)
Compiling 1 file in C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411
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ments\fiji-win64\Fiji.app\jars\trakem2-transform-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\trakem2_tps-1.1.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\trove4j-3.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\turbojpeg-5.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\udunits-4.3.18.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\ui-behaviour-1.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\utils-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\vecmath-1.6.0-scijava-2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weave_jy2java-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weka-dev-3.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xerbla-0.8.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xercesImpl-2.8.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xml-apis-ext-1.3.04.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmlgraphics-commons-2.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmpcore-5.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xz-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\yecht-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\z_spacing-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\zipfs.jar, -d, C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\target\classes, C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\src\main\java\RGB_Profiler.java]
using the class path: C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\target\classes;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Blob_Segmentation-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Objects_Counter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Viewer-4.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\AnalyzeSkeleton_-3.3.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Anisotropic_Diffusion_2D-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Archipelago_Plugins-0.5.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Arrow_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Auto_Local_Threshold-1.10.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Auto_Threshold-1.17.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\BalloonSegmentation_-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Bug_Submitter-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\CPU_Meter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Calculator_Plus-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Cell_Counter-2.2.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Colocalisation_Analysis-3.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Color_Histogram-2.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Color_Inspector_3D-2.3.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Colour_Deconvolution-3.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\CorrectBleach_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Correct_3D_Drift-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Descriptor_based_registration-2.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Dichromacy_-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Directionality_-2.3.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\FS_Align_TrakEM2-2.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Feature_Detection-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Archipelago-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Developer-2.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Package_Maker-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Plugins-3.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\FlowJ_-1.29.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Graph_Cut-1.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Gray_Morphology-2.3.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\H5J_Loader_Plugin-1.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\HDF5_Vibez-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Helmholtz_Analysis-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IJ_Robot-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IO_-3.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Image_5D-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Image_Expression_Parser-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Interactive_3D_Surface_Plot-3.0.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IsoData_Classifier-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\JWlz-1.4.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Kuwahara_Filter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\KymographBuilder-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LSM_Reader-4.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LSM_Toolbox-4.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Lasso_and_Blow_Tool-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Linear_Kuwahara-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LocalThickness_-4.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\MTrack2_-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\M_I_P-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Manual_Tracking-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Multi_Kymograph-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\OMEVisual-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\PIV_analyser-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\QuickPALM_-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\RATS_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Reconstruct_Reader-2.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SPIM_Opener-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SPIM_Registration-5.0.19.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Samples_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Series_Labeler-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Sholl_Analysis-3.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Simple_Neurite_Tracer-3.1.6.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Siox_Segmentation-1.0.5.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Skeletonize3D_-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SplineDeformationGenerator_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Stack_Manipulation-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Statistical_R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ments\fiji-win64\Fiji.app\jars\trakem2-transform-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\trakem2_tps-1.1.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\trove4j-3.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\turbojpeg-5.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\udunits-4.3.18.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\ui-behaviour-1.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\utils-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\vecmath-1.6.0-scijava-2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weave_jy2java-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weka-dev-3.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xerbla-0.8.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xercesImpl-2.8.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xml-apis-ext-1.3.04.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmlgraphics-commons-2.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmpcore-5.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xz-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\yecht-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\z_spacing-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\zipfs.jar
No javax.tools.JavaCompiler available. Checking for explicit javac.
No javac.jar found (looked in F:\My documents\fiji-win64\Fiji.app\jars)!
java.lang.ClassNotFoundException: com.sun.tools.javac.Main
              at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
              at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
              at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331)
              at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
              at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:94)
              at org.scijava.minimaven.MavenProject.build(MavenProject.java:538)
              at org.scijava.minimaven.MavenProject.build(MavenProject.java:463)
              at org.scijava.minimaven.MavenProject.build(MavenProject.java:446)
              at org.scijava.plugins.scripting.java.JavaEngine.compile(JavaEngine.java:209)
              at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:136)
              at org.scijava.script.ScriptModule.run(ScriptModule.java:160)
              at org.scijava.module.ModuleRunner.run(ModuleRunner.java:168)
              at org.scijava.module.ModuleRunner.call(ModuleRunner.java:127)
              at org.scijava.module.ModuleRunner.call(ModuleRunner.java:66)
              at org.scijava.thread.DefaultThreadService$3.call(DefaultThreadService.java:238)
              at java.util.concurrent.FutureTask.run(FutureTask.java:266)
              at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
              at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
              at java.lang.Thread.run(Thread.java:745)
Could not find javac java.lang.ClassNotFoundException: com.sun.tools.javac.Main, falling back to system javac
Executing: 'javac' '-classpath' 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uments\fiji-win64\Fiji.app\jars\trakem2-transform-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\trakem2_tps-1.1.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\trove4j-3.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\turbojpeg-5.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\udunits-4.3.18.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\ui-behaviour-1.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\utils-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\vecmath-1.6.0-scijava-2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weave_jy2java-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weka-dev-3.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xerbla-0.8.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xercesImpl-2.8.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xml-apis-ext-1.3.04.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmlgraphics-commons-2.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmpcore-5.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xz-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\yecht-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\z_spacing-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\zipfs.jar' '-d' 'C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\target\classes' 'C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\src\main\java\RGB_Profiler.java'
[ERROR] null
java.lang.RuntimeException: Could not even fall back  to javac in the PATH
              at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:129)
              at org.scijava.minimaven.MavenProject.build(MavenProject.java:538)
              at org.scijava.minimaven.MavenProject.build(MavenProject.java:463)
              at org.scijava.minimaven.MavenProject.build(MavenProject.java:446)
              at org.scijava.plugins.scripting.java.JavaEngine.compile(JavaEngine.java:209)
              at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:136)
              at org.scijava.script.ScriptModule.run(ScriptModule.java:160)
              at org.scijava.module.ModuleRunner.run(ModuleRunner.java:168)
              at org.scijava.module.ModuleRunner.call(ModuleRunner.java:127)
              at org.scijava.module.ModuleRunner.call(ModuleRunner.java:66)
              at org.scijava.thread.DefaultThreadService$3.call(DefaultThreadService.java:238)
              at java.util.concurrent.FutureTask.run(FutureTask.java:266)
              at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
              at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
              at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.RuntimeException: java.io.IOException: Cannot run program "javac" (in directory "."): CreateProcess error=2, The system cannot find the file specified
              at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:138)
              at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:72)
              at org.scijava.minimaven.JavaCompiler.execute(JavaCompiler.java:169)
              at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:126)
              ... 14 more
Caused by: java.io.IOException: Cannot run program "javac" (in directory "."): CreateProcess error=2, The system cannot find the file specified
              at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
              at java.lang.Runtime.exec(Runtime.java:620)
              at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:99)
              ... 17 more
Caused by: java.io.IOException: CreateProcess error=2, The system cannot find the file specified
              at java.lang.ProcessImpl.create(Native Method)
              at java.lang.ProcessImpl.<init>(ProcessImpl.java:386)
              at java.lang.ProcessImpl.start(ProcessImpl.java:137)
              at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
              ... 19 more


Richard Cole
Research Scientist V
Director: Advanced Light Microscopy & Image Analysis Core
Wadsworth Center

Research Assistant Professor
Dept. of Biomedical Sciences
School of Public Health State University of New York

120 New Scotland Avenue, Albany N.Y. 12208
518-474-7048 Phone
518-408-1730 Fax
[cid:image001.jpg@01D1F242.5B52C750]


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Re: RGB profiler

bnorthan
Hi Rich

Judging by the error message it seems it is trying to compile the java
code, and failing because it can't find the compiler.  Did you by chance
download RGB_Profiler.java instead of RGB_Profiler.class??  If that was
unintentional then download RGB_Profiler.class, put it in the plugins
folder, delete RGB_Profiler.java and see if that helps.

https://imagej.nih.gov/ij/plugins/rgb-profiler.html

Brian

On Wed, Nov 28, 2018 at 7:08 AM Cole, Richard W (HEALTH) <
[hidden email]> wrote:

> Dear all,
>
> It seems that the plug-in RGB profiler is through the following error:  Is
> this know or is there a workaround?
>
> RGB_Profiler not up-to-date because 1 source files are not up-to-date
> (C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\src\main\java\RGB_Profiler.java)
> Compiling 1 file in
> C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411
> [-classpath,
> 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ments\fiji-win64\Fiji.app\jars\trakem2-transform-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\trakem2_tps-1.1.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\trove4j-3.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\turbojpeg-5.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\udunits-4.3.18.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\ui-behaviour-1.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\utils-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\vecmath-1.6.0-scijava-2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weave_jy2java-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weka-dev-3.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xerbla-0.8.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xercesImpl-2.8.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xml-apis-ext-1.3.04.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmlgraphics-commons-2.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmpcore-5.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xz-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\yecht-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\z_spacing-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\zipfs.jar,
> -d,
> C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\target\classes,
> C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\src\main\java\RGB_Profiler.java]
> using the class path:
> C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\target\classes;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Blob_Segmentation-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Objects_Counter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Viewer-4.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\AnalyzeSkeleton_-3.3.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Anisotropic_Diffusion_2D-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Archipelago_Plugins-0.5.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Arrow_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Auto_Local_Threshold-1.10.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Auto_Threshold-1.17.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\BalloonSegmentation_-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Bug_Submitter-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\CPU_Meter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Calculator_Plus-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Cell_Counter-2.2.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Colocalisation_Analysis-3.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Color_Histogram-2.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Color_Inspector_3D-2.3.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Colour_Deconvolution-3.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\CorrectBleach_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Correct_3D_Drift-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Descriptor_based_registration-2.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Dichromacy_-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Directionality_-2.3.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\FS_Align_TrakEM2-2.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Feature_Detection-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Archipelago-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Developer-2.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Package_Maker-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Plugins-3.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\FlowJ_-1.29.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Graph_Cut-1.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Gray_Morphology-2.3.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\H5J_Loader_Plugin-1.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\HDF5_Vibez-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Helmholtz_Analysis-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IJ_Robot-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IO_-3.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Image_5D-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Image_Expression_Parser-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Interactive_3D_Surface_Plot-3.0.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IsoData_Classifier-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\JWlz-1.4.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Kuwahara_Filter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\KymographBuilder-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LSM_Reader-4.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LSM_Toolbox-4.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Lasso_and_Blow_Tool-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Linear_Kuwahara-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LocalThickness_-4.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\MTrack2_-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\M_I_P-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Manual_Tracking-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Multi_Kymograph-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\OMEVisual-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\PIV_analyser-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\QuickPALM_-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\RATS_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Reconstruct_Reader-2.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SPIM_Opener-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SPIM_Registration-5.0.19.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Samples_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Series_Labeler-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Sholl_Analysis-3.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Simple_Neurite_Tracer-3.1.6.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Siox_Segmentation-1.0.5.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Skeletonize3D_-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SplineDeformationGenerator_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Stack_Manipulation-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Statistical_R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ments\fiji-win64\Fiji.app\jars\trakem2-transform-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\trakem2_tps-1.1.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\trove4j-3.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\turbojpeg-5.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\udunits-4.3.18.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\ui-behaviour-1.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\utils-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\vecmath-1.6.0-scijava-2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weave_jy2java-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weka-dev-3.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xerbla-0.8.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xercesImpl-2.8.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xml-apis-ext-1.3.04.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmlgraphics-commons-2.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmpcore-5.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xz-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\yecht-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\z_spacing-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\zipfs.jar
> No javax.tools.JavaCompiler available. Checking for explicit javac.
> No javac.jar found (looked in F:\My documents\fiji-win64\Fiji.app\jars)!
> java.lang.ClassNotFoundException: com.sun.tools.javac.Main
>               at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
>               at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
>               at
> sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331)
>               at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
>               at
> org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:94)
>               at
> org.scijava.minimaven.MavenProject.build(MavenProject.java:538)
>               at
> org.scijava.minimaven.MavenProject.build(MavenProject.java:463)
>               at
> org.scijava.minimaven.MavenProject.build(MavenProject.java:446)
>               at
> org.scijava.plugins.scripting.java.JavaEngine.compile(JavaEngine.java:209)
>               at
> org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:136)
>               at org.scijava.script.ScriptModule.run(ScriptModule.java:160)
>               at org.scijava.module.ModuleRunner.run(ModuleRunner.java:168)
>               at
> org.scijava.module.ModuleRunner.call(ModuleRunner.java:127)
>               at org.scijava.module.ModuleRunner.call(ModuleRunner.java:66)
>               at
> org.scijava.thread.DefaultThreadService$3.call(DefaultThreadService.java:238)
>               at java.util.concurrent.FutureTask.run(FutureTask.java:266)
>               at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>               at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>               at java.lang.Thread.run(Thread.java:745)
> Could not find javac java.lang.ClassNotFoundException:
> com.sun.tools.javac.Main, falling back to system javac
> Executing: 'javac' '-classpath'
> 'C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\target\classes;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Blob_Segmentation-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Objects_Counter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\3D_Viewer-4.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\AnalyzeSkeleton_-3.3.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Anisotropic_Diffusion_2D-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Archipelago_Plugins-0.5.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Arrow_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Auto_Local_Threshold-1.10.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Auto_Threshold-1.17.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\BalloonSegmentation_-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Bug_Submitter-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\CPU_Meter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Calculator_Plus-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Cell_Counter-2.2.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Colocalisation_Analysis-3.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Color_Histogram-2.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Color_Inspector_3D-2.3.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Colour_Deconvolution-3.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\CorrectBleach_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Correct_3D_Drift-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Descriptor_based_registration-2.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Dichromacy_-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Directionality_-2.3.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\FS_Align_TrakEM2-2.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Feature_Detection-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Archipelago-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Developer-2.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Package_Maker-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Fiji_Plugins-3.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\FlowJ_-1.29.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Graph_Cut-1.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Gray_Morphology-2.3.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\H5J_Loader_Plugin-1.0.7.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\HDF5_Vibez-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Helmholtz_Analysis-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IJ_Robot-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IO_-3.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Image_5D-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Image_Expression_Parser-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Interactive_3D_Surface_Plot-3.0.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\IsoData_Classifier-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\JWlz-1.4.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Kuwahara_Filter-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\KymographBuilder-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LSM_Reader-4.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LSM_Toolbox-4.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Lasso_and_Blow_Tool-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Linear_Kuwahara-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\LocalThickness_-4.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\MTrack2_-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\M_I_P-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Manual_Tracking-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Multi_Kymograph-3.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\OMEVisual-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\PIV_analyser-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\QuickPALM_-1.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\RATS_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Reconstruct_Reader-2.0.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SPIM_Opener-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SPIM_Registration-5.0.19.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Samples_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Series_Labeler-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Sholl_Analysis-3.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Simple_Neurite_Tracer-3.1.6.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Siox_Segmentation-1.0.5.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Skeletonize3D_-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\SplineDeformationGenerator_-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Stack_Manipulation-2.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\Statistical_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:\My%20documents\fiji-win64\Fiji.app\jars\netlib-java-0.9.3-renjin-patched-2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\object-inspector-0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\objenesis-2.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\ojalgo-45.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\ome-codecs-0.2.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\ome-common-5.3.6.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\ome-jai-0.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\ome-mdbtools-5.3.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\ome-poi-5.3.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\ome-xml-5.6.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\op-finder-0.1.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\opencsv-3.9.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\options-1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\pal-optimization-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\panorama_-3.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\parsington-1.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\perf4j-0.9.13.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\plexus-utils-1.5.6.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\postgresql-9.1-901-1.jdbc4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\prettytime-4.0.1.Final.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\regexp-1.3.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\register_virtual_stack_slices-3.0.5.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\registration_3d-2.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\renjin-appl-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\renjin-core-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\renjin-gnur-runtime-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\renjin-script-engine-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\rhino-1.7.6.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\rsyntaxtextarea-2.6.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scala-compiler-2.12.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scala-library-2.12.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scala-reflect-2.12.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scala-xml_2.12-1.0.6.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scifio-0.37.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scifio-bf-compat-3.0.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scifio-cli-0.5.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scifio-hdf5-0.1.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scifio-jai-imageio-1.1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scifio-lifesci-0.8.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scifio-ome-xml-0.15.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-common-2.75.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-config-2.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-plugins-commands-0.2.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-plugins-platforms-0.3.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-plugins-text-markdown-0.1.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-plugins-text-plain-0.1.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-search-0.5.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-ui-awt-0.1.6.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scijava-ui-swing-0.11.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\script-editor-0.3.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-beanshell-0.3.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-clojure-0.1.6.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-groovy-0.2.7.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-java-0.4.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-javascript-0.4.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-jruby-0.2.5.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-jython-0.4.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-renjin-0.2.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\scripting-scala-0.2.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\slf4j-api-1.7.25.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\snakeyaml-1.13.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\specification-5.6.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\spim_data-2.2.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\stats-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunec.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunjce_provider.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunmscapi.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunpkcs11.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\swing-checkbox-tree-1.0.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\swing-worker-1.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\swingx-1.6.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\trakem2-transform-1.0.1.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\trakem2_tps-1.1.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\trove4j-3.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\bio-formats\turbojpeg-5.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\udunits-4.3.18.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\ui-behaviour-1.7.4.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\utils-0.8.1906.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\vecmath-1.6.0-scijava-2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weave_jy2java-2.1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\weka-dev-3.9.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xerbla-0.8.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xercesImpl-2.8.1.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xml-apis-ext-1.3.04.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmlgraphics-commons-2.3.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xmpcore-5.1.2.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\xz-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\jars\yecht-1.0.jar;F:\My%20documents\fiji-win64\Fiji.app\plugins\z_spacing-1.0.3.jar;F:\My%20documents\fiji-win64\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\zipfs.jar'
> '-d'
> 'C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\target\classes'
> 'C:\Users\rwc02\AppData\Local\Temp\java8783538663139439411\src\main\java\RGB_Profiler.java'
> [ERROR] null
> java.lang.RuntimeException: Could not even fall back  to javac in the PATH
>               at
> org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:129)
>               at
> org.scijava.minimaven.MavenProject.build(MavenProject.java:538)
>               at
> org.scijava.minimaven.MavenProject.build(MavenProject.java:463)
>               at
> org.scijava.minimaven.MavenProject.build(MavenProject.java:446)
>               at
> org.scijava.plugins.scripting.java.JavaEngine.compile(JavaEngine.java:209)
>               at
> org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:136)
>               at org.scijava.script.ScriptModule.run(ScriptModule.java:160)
>               at org.scijava.module.ModuleRunner.run(ModuleRunner.java:168)
>               at
> org.scijava.module.ModuleRunner.call(ModuleRunner.java:127)
>               at org.scijava.module.ModuleRunner.call(ModuleRunner.java:66)
>               at
> org.scijava.thread.DefaultThreadService$3.call(DefaultThreadService.java:238)
>               at java.util.concurrent.FutureTask.run(FutureTask.java:266)
>               at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>               at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>               at java.lang.Thread.run(Thread.java:745)
> Caused by: java.lang.RuntimeException: java.io.IOException: Cannot run
> program "javac" (in directory "."): CreateProcess error=2, The system
> cannot find the file specified
>               at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:138)
>               at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:72)
>               at
> org.scijava.minimaven.JavaCompiler.execute(JavaCompiler.java:169)
>               at
> org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:126)
>               ... 14 more
> Caused by: java.io.IOException: Cannot run program "javac" (in directory
> "."): CreateProcess error=2, The system cannot find the file specified
>               at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
>               at java.lang.Runtime.exec(Runtime.java:620)
>               at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:99)
>               ... 17 more
> Caused by: java.io.IOException: CreateProcess error=2, The system cannot
> find the file specified
>               at java.lang.ProcessImpl.create(Native Method)
>               at java.lang.ProcessImpl.<init>(ProcessImpl.java:386)
>               at java.lang.ProcessImpl.start(ProcessImpl.java:137)
>               at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
>               ... 19 more
>
>
> Richard Cole
> Research Scientist V
> Director: Advanced Light Microscopy & Image Analysis Core
> Wadsworth Center
>
> Research Assistant Professor
> Dept. of Biomedical Sciences
> School of Public Health State University of New York
>
> 120 New Scotland Avenue, Albany N.Y. 12208
> 518-474-7048 Phone
> 518-408-1730 Fax
> [cid:image001.jpg@01D1F242.5B52C750]
>
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
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