ImageJ area determination

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ImageJ area determination

shriarjun shastry
Hi,

My name is Shriarjun Shastry and I have been doing some projects with
process development in chemical and biochemical engineering.

In one of my recent projects I used the image J software to determine the
area of solids at the bottom of the reactor. I have attached some images.

What would be the best way to determine the area of solids?  I have to do
this many times so I would prefer to know if there is a way I can make
settings on the software so that I get the area results as soon as I put
the image in the software.

I really Appreciate your help.

Let me know

Thanks
Arjun

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Re: ImageJ area determination

Christian Liebig-3
Hi Arjun,

I would create a macro, roughly including the following steps:

  * calculate the difference between a picture with solids deposited and
    a control picture of the same reactor without any deposits
  * threshold the resulting image
  * "Measure" the whole image (in the "Set Measurements" dialogue you
    need to check "area" and "limit to threshold")

Best,

Christian


On 14.05.2018 21:08, shriarjun shastry wrote:

> Hi,
>
> My name is Shriarjun Shastry and I have been doing some projects with
> process development in chemical and biochemical engineering.
>
> In one of my recent projects I used the image J software to determine the
> area of solids at the bottom of the reactor. I have attached some images.
>
> What would be the best way to determine the area of solids?  I have to do
> this many times so I would prefer to know if there is a way I can make
> settings on the software so that I get the area results as soon as I put
> the image in the software.
>
> I really Appreciate your help.
>
> Let me know
>
> Thanks
> Arjun
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
Christian Feldhaus, PhD
Light Microscopy Facility
MPI for Developmental Biology

Max-Planck-Ring 5 (Spemannstrasse 35)
72076 Tübingen
Germany

deliveries to:
Max-Planck-Ring 1
72076 Tübingen

Tel.: ++49 7071 601443


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