Help compiling a legacy plugin

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Help compiling a legacy plugin

Joel Sheffield
Colleagues,
I have come across a plugin ( RG2B_Colocalization.java) by Philip
Maurer(2004) that looks as if it would be useful for a course that I am
teaching.  However, the plugin is presented only in a java version.  When I
download the java file, I find that I am unable to compile it --legacy
issues, I think.  So, I was wondering if anyone has a compiled version that
will work with the current Fiji or ImageJ implementation. -- or can suggest
a way to do this.

My thanks to all.
Joel




Joel B. Sheffield, Ph.D
Department of Biology
Temple University
Philadelphia, PA 19122
Voice: 215 204 8839
e-mail: [hidden email]
Office:  Biolife 311
URL:  *https://bio.cst.temple.edu/~jbs/ <https://bio.cst.temple.edu/~jbs/>
<http://tinyurl.com/khbouft>*

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Re: Help compiling a legacy plugin

Gabriel Landini
Hi Joel,
I was able to compile it under Java 1.6 and emailed a copy to you.
Sometimes the mail servers reject some files. If you haven't received it,
email me and will find another way of sending it.

Regards

Gabriel


On Tuesday, 9 April 2019 15:05:29 BST Joel Sheffield wrote:

> Colleagues,
> I have come across a plugin ( RG2B_Colocalization.java) by Philip
> Maurer(2004) that looks as if it would be useful for a course that I am
> teaching.  However, the plugin is presented only in a java version.  When I
> download the java file, I find that I am unable to compile it --legacy
> issues, I think.  So, I was wondering if anyone has a compiled version that
> will work with the current Fiji or ImageJ implementation. -- or can suggest
> a way to do this.
>
> My thanks to all.
> Joel
>
>
>
>
> Joel B. Sheffield, Ph.D
> Department of Biology
> Temple University
> Philadelphia, PA 19122
> Voice: 215 204 8839
> e-mail: [hidden email]
> Office:  Biolife 311
> URL:  *https://bio.cst.temple.edu/~jbs/ <https://bio.cst.temple.edu/~jbs/>
> <http://tinyurl.com/khbouft>*
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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Re: Help compiling a legacy plugin

Herbie
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Re: Help compiling a legacy plugin

Herbie
In reply to this post by Joel Sheffield
Good day Joel,

a link would have been helpful...

In ImageJ "Plugins >> Compile and Run..." works perfectly for me.
(It is really a pity that this basic functionality doesn't work in Fiji.)

Attached please find the zipped Plugin.

Regards

Herbie
RG2B_Colocalization.zip
<http://imagej.1557.x6.nabble.com/file/t380516/RG2B_Colocalization.zip>  

:::::::::::::::::::::::::::::::::::::::::::

Joel Sheffield wrote

> Colleagues,
> I have come across a plugin ( RG2B_Colocalization.java) by Philip
> Maurer(2004) that looks as if it would be useful for a course that I am
> teaching.  However, the plugin is presented only in a java version.  When
> I
> download the java file, I find that I am unable to compile it --legacy
> issues, I think.  So, I was wondering if anyone has a compiled version
> that
> will work with the current Fiji or ImageJ implementation. -- or can
> suggest
> a way to do this.
>
> My thanks to all.
> Joel
>
>
>
>
> Joel B. Sheffield, Ph.D
> Department of Biology
> Temple University
> Philadelphia, PA 19122
> Voice: 215 204 8839
> e-mail:

> jbs@

> Office:  Biolife 311
> URL:  *https://bio.cst.temple.edu/~jbs/
> &lt;https://bio.cst.temple.edu/~jbs/&gt;
> &lt;http://tinyurl.com/khbouft&gt;*
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html





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Re: Help compiling a legacy plugin

Joel Sheffield
Thank you all!  It turns out that my standard ImageJ is installed with the
wrong Java compiler for that program.  I'm delighted that others were able
to do it.  Next time I run into a similar problem, I'll include a link.

Joel


Joel B. Sheffield, Ph.D
Department of Biology
Temple University
Philadelphia, PA 19122
Voice: 215 204 8839
e-mail: [hidden email]
Office:  Biolife 311
URL:  *https://bio.cst.temple.edu/~jbs/ <https://bio.cst.temple.edu/~jbs/>
<http://tinyurl.com/khbouft>*


On Tue, Apr 9, 2019 at 10:34 AM Herbie <[hidden email]> wrote:

> Good day Joel,
>
> a link would have been helpful...
>
> In ImageJ "Plugins >> Compile and Run..." works perfectly for me.
> (It is really a pity that this basic functionality doesn't work in Fiji.)
>
> Attached please find the zipped Plugin.
>
> Regards
>
> Herbie
> RG2B_Colocalization.zip
> <http://imagej.1557.x6.nabble.com/file/t380516/RG2B_Colocalization.zip>
>
> :::::::::::::::::::::::::::::::::::::::::::
>
> Joel Sheffield wrote
> > Colleagues,
> > I have come across a plugin ( RG2B_Colocalization.java) by Philip
> > Maurer(2004) that looks as if it would be useful for a course that I am
> > teaching.  However, the plugin is presented only in a java version.  When
> > I
> > download the java file, I find that I am unable to compile it --legacy
> > issues, I think.  So, I was wondering if anyone has a compiled version
> > that
> > will work with the current Fiji or ImageJ implementation. -- or can
> > suggest
> > a way to do this.
> >
> > My thanks to all.
> > Joel
> >
> >
> >
> >
> > Joel B. Sheffield, Ph.D
> > Department of Biology
> > Temple University
> > Philadelphia, PA 19122
> > Voice: 215 204 8839
> > e-mail:
>
> > jbs@
>
> > Office:  Biolife 311
> > URL:  *https://bio.cst.temple.edu/~jbs/
> > &lt;https://bio.cst.temple.edu/~jbs/&gt;
> > &lt;http://tinyurl.com/khbouft&gt;*
> >
> > --
> > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
>
>
>
>
> --
> Sent from: http://imagej.1557.x6.nabble.com/
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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