Error while opening data

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Error while opening data

徐 大哲
Hi everyone,

I got the error message when I loaded HDF5 file by the plugin (HDF5).
       ‘Error while opening ‘…’, dataset ‘…’.
       Java.lang.IllegalArgumentException: Length is too large (4166221824)
How can I solve this problem?

Dazhe

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Re: Error while opening data

TimFeinstein
Hi Dazhe,  although SVI software like Huygens generates the HDF5 format by default, as far as I know no third party software can read it.  Surprisingly even Bio-Formats can't open it.  Whenever I work with Huygens software I always export in .ics2 file format.  Ideally I would like to export as a Tiff but Huygens always saves Tiffs with the channels split into different files.  

Best,


T

Timothy Feinstein, Ph.D.
Research Scientist
Department of Developmental Biology
University of Pittsburgh

 


On 11/9/20, 3:43 AM, "ImageJ Interest Group on behalf of 徐 大哲" <[hidden email] on behalf of [hidden email]> wrote:

    Hi everyone,

    I got the error message when I loaded HDF5 file by the plugin (HDF5).
           ‘Error while opening ‘…’, dataset ‘…’.
           Java.lang.IllegalArgumentException: Length is too large (4166221824)
    How can I solve this problem?

    Dazhe

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    ImageJ mailing list: https://nam12.safelinks.protection.outlook.com/?url=http%3A%2F%2Fimagej.nih.gov%2Fij%2Flist.html&amp;data=04%7C01%7Ctnf8%40pitt.edu%7Cf410918c71714ebac7a608d8848b8581%7C9ef9f489e0a04eeb87cc3a526112fd0d%7C1%7C1%7C637405082067869626%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&amp;sdata=bPIMvopDXv9C1cWEfvjtUIzYPyFCSSrSHMJ8nQ6geqY%3D&amp;reserved=0


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