Beginner to developing plugin for imagej

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Beginner to developing plugin for imagej

Rohitesh Gupta
Hi Guys,

I am interested in developing a plugin on imagej. Since I am not aware of the methodology on where to begin, thus asking here if there is any good introductory material which I can go through to start working on it ?
Which language is generally preferred for writing plugins, JAVA or macros or both are used. Is there an example code for a simple plugin which I can read to understand where to begin ? Any help will be much appreciated in this regard.

Thanks,
Rohitesh

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Re: Beginner to developing plugin for imagej

Ziqiang Huang-2
Simply googling keywords “writing plugin ImageJ” should get you plenty
useful tutorial pages, covering almost all aspects in your question. If you
go through the first page returned, you should have had a good idea how and
where to start. It’s even less effort than opening an email thread.
If you would struggling with multiple choices, the following page is a good
beginner’s guide:
https://imagej.net/Development

Good luck.


On Sun, 14 Apr 2019 at 18:14, Rohitesh Gupta <[hidden email]>
wrote:

> Hi Guys,
>
> I am interested in developing a plugin on imagej. Since I am not aware of
> the methodology on where to begin, thus asking here if there is any good
> introductory material which I can go through to start working on it ?
> Which language is generally preferred for writing plugins, JAVA or macros
> or both are used. Is there an example code for a simple plugin which I can
> read to understand where to begin ? Any help will be much appreciated in
> this regard.
>
> Thanks,
> Rohitesh
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
--
Ziqiang Huang

Bioimage Analyst of Light Microscopy Facility
CRUK Cambridge Institute
Li Ka Shing Centre
Robinson Way
Cambridge, UK
CB2 0RE
01223-769538
email: [hidden email] <[hidden email]>

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Re: Beginner to developing plugin for imagej

Herbie
In reply to this post by Rohitesh Gupta
Good day,

please note that ImageJ-plugins and -macros differ in many aspects.

Plugins are always written in Java. Here is a good introduction:
<https://imagingbook.files.wordpress.com/2013/06/tutorial171.pdf>

The ImageJ-macro language is mainly meant for rapid prototyping, i.e. for
calling plugins in a desired order. Here is a description
<https://imagej.nih.gov/ij/developer/macro/macros.html>
and here is a commented list of built-in functions.
<https://imagej.nih.gov/ij/developer/macro/functions.html>

To start with writing plugins or macros you should consider using the
macro-recorder functionality of ImageJ. (Select either macro or java.)

HTH

Herbie

:::::::::::::::::::::::::::::::::::::::::::::::::::::::::

Rohitesh Gupta wrote

> Hi Guys,
>
> I am interested in developing a plugin on imagej. Since I am not aware of
> the methodology on where to begin, thus asking here if there is any good
> introductory material which I can go through to start working on it ?
> Which language is generally preferred for writing plugins, JAVA or macros
> or both are used. Is there an example code for a simple plugin which I can
> read to understand where to begin ? Any help will be much appreciated in
> this regard.
>
> Thanks,
> Rohitesh
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html





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Sent from: http://imagej.1557.x6.nabble.com/

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Re: Beginner to developing plugin for imagej

Albert Cardona-2
In reply to this post by Rohitesh Gupta
Hi Rohitesh,

While there are numerous resources online, I'd like to refer you to my own:

An introduction to the very basics of writing java plugins for ImageJ,
including conventions for variable names:
https://albert.rierol.net/imagej_programming_tutorials.html#ImageJ%20programming%20basics

A tutorial on learning to use python (jython) for Fiji (an ImageJ
distribution with numerous libraries).
This tutorial teaches both python and image processing with Fiji, from
basics to rather advanced:
https://www.ini.uzh.ch/~acardona/fiji-tutorial/

Also, the best place for these questions and for getting promptly help
is nowadays the forum:
https://forum.image.sc/

Best,

Albert

Missatge de Rohitesh Gupta <[hidden email]> del dia dg., 14
d’abr. 2019 a les 17:14:

>
> Hi Guys,
>
> I am interested in developing a plugin on imagej. Since I am not aware of the methodology on where to begin, thus asking here if there is any good introductory material which I can go through to start working on it ?
> Which language is generally preferred for writing plugins, JAVA or macros or both are used. Is there an example code for a simple plugin which I can read to understand where to begin ? Any help will be much appreciated in this regard.
>
> Thanks,
> Rohitesh
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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Re: Beginner to developing plugin for imagej

Herbie
"for getting promptly help"

Yesterday already the OP received prompt help within minutes...

Of course your help is always highly appreciate!

Regards

Herbie

::::::::::::::::::::::::::::::::::::::::::::
Am 15.04.19 um 16:09 schrieb Albert Cardona:

> Hi Rohitesh,
>
> While there are numerous resources online, I'd like to refer you to my own:
>
> An introduction to the very basics of writing java plugins for ImageJ,
> including conventions for variable names:
> https://albert.rierol.net/imagej_programming_tutorials.html#ImageJ%20programming%20basics
>
> A tutorial on learning to use python (jython) for Fiji (an ImageJ
> distribution with numerous libraries).
> This tutorial teaches both python and image processing with Fiji, from
> basics to rather advanced:
> https://www.ini.uzh.ch/~acardona/fiji-tutorial/
>
> Also, the best place for these questions and for getting promptly help
> is nowadays the forum:
> https://forum.image.sc/
>
> Best,
>
> Albert
>
> Missatge de Rohitesh Gupta <[hidden email]> del dia dg., 14
> d’abr. 2019 a les 17:14:
>>
>> Hi Guys,
>>
>> I am interested in developing a plugin on imagej. Since I am not aware of the methodology on where to begin, thus asking here if there is any good introductory material which I can go through to start working on it ?
>> Which language is generally preferred for writing plugins, JAVA or macros or both are used. Is there an example code for a simple plugin which I can read to understand where to begin ? Any help will be much appreciated in this regard.
>>
>> Thanks,
>> Rohitesh
>>
>> --
>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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